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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889094.1_cds_XP_016443778.1_38909
CDS Infomation

[gene=LOC107769108] [db_xref=GeneID:107769108] [protein=TPR repeat-containing thioredoxin TTL1-like] [protein_id=XP_016443778.1] [location=join(23340..24154,25327..25522,25612..25793,25881..26214,26340..26544,26621..26727,26895..27047)] [gbkey=CDS]
Sequence

ATGTCAGAAATGGGTCTTAATGGTCTAACTGATCGGTTGAAAAACTCACTGAGCTGCAAT
GAATTTAACAACGATGGCACCGAAATTAACAAGCCTGATTTCAGAGAACTGGATCTGAGT
TCACCCGTTTCAACTCGCCCCAAATCGAATGGAGTCACAACTTCAACAAGCAGCAGCTCC
AGCTCATCCGGATCAATGTCGGGTCAGAATGGTTCCTACCCGAATCCTAACAGGTTCAAT
ACGAATCATTCCGGTGAACTTTCCGGTTCAGTAGATAGCTCACGTCGGTTCAAACCAGGC
CATACCAGGTCCCGGTCTGATTCTCAACCGCTAATCTGCTCCGGTAGAAGCTCTGTAAAT
TCCCCTGCTTTAAATTCACTTCCCACAGGCAATATTTGCCCTTCAGGTAAAATTTTAAAA
ACAGCTATTCCAAGTAAATCTTCAAAGACTGATGTTTTTGGGTCAAGAACCGGAAATTAC
GGCATTGGCAGCATAATTCGGGGCGGTGGGGTTGATATTAGCGGTGCTGCCAATGCCGTA
AAAGAAAAAACTTACTCGCAGTTTGCATCAAATCCAGAAGAGTTGAAGAGAGTAGGGAAT
GTGAATTATAAGAAGGGTAATTTTGCTGAGGCTTTGAATTATTATGATAAAGCTATAGCG
ATTTCGCCTGGAAATTCTGCATACCATTGTAATCGGGCAGCTGCATTGATGGGTCTTAAA
CGGGTGGCGGAGGCTGTGAAGGAATGTGAGGAAGCCATTAGATTGGATCCGTCATATTTT
AGGGCGCATCAACGGCTAGGATCTTTGCTACTTAGTTTAGGGCAGGTTGAAAATGCCAGA
GATCATATGTGCTTCCAAGGGCATCAGCCAGATCAGGCTGATTTACAGAAGTTGCAAGCA
GTGGAGAAACATATTGGAAAATGCACTGATGCACGTAGGGTTGGTGATTGGTGGAGTACA
TTGAGAGAAGCTGATGCAGCAATTGCTTCTGGAGCTGATGCATCTCCTCAGCTATTTGCA
TGTAGAGCGGAAGCTCTTTTGAAGCTACACCGATTACAGGATGCTGAATTGAGCCTATCA
AATGCTCGCAAGTCTGAATCATCTACTGTGGGATCCCAGTCAAAAATTTTTGGGATGCTC
TCTGAAGCATACATACTCTTTGTTCAGTCTCAAATGGAGCTGGCTCTGGGAAGGTTTGCA
AATGCACTTACCACCATTGAGAGAGCTGGACAGATTGATCCTCGAAGTATTGAAGTTTCA
GTTTTATTCAACAATATGAGGTTGGTGGGACGAGCTCGTGCTCGTGGCAACGATCTATTT
AAATCTGAGAGATACACTGAAGCTTGTGCGGCTTATGGGGAAGGTCTCAGGCTAGATTCT
TCAAATGCAGTTCTATACTGCAATAGAGCAGCCTGCTGGTACAAACTCAGGCAGTGGGAA
AAATCAGTGGATGATTGCGATCAAGCTCTCCATATTCAGCCAAATTATACTAAAGCCCTT
CTTCGAAGAGCTGCCTCAAACACCAAGCTAGAAAGATGGGCTGAAGCTGTTAGAGATTAT
GAAGTTTTGAGGAAGGAACTTCCACAGGACAATGAAGTTGCTGAATCATTATTCCTAGCC
CAAGTTGCCTTAAAGAAATCACGTGGAGAAGATATTTCCGATATTAAATTTGGCAAGGAG
GTGGAGTTGGTTTCAGGTCTCGAGCAGTTTCAAGCTGCAATCTCATCACCTGGTGCATCT
GTAGTCCATTTTGAAGCAGCATCCAACCTAAAATGCAAGCAGATATCTCCAGTTTTTCAC
ACATTATGCACTAAATATCCTTCCATGAACTTTCTCAAGGTGGATGTGGACGAAAGCCCG
GCAATTGCTACTGCAGAGAATGTCAGAATCCTACCAACATTTAAGATTTACAAACAGGGC
AGCTGCATAAAGGAGGTAGTTTCGCCAAGCCCAGAGGTGTTGGAGTCATTGGTGAGGCAT
TACCCTATTTAA

Peptide Sequence

PEP ID

XP_016443778.1
PEP Infomation

PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Nicotiana tabacum]
Sequence

MSEMGLNGLTDRLKNSLSCNEFNNDGTEINKPDFRELDLSSPVSTRPKSNGVTTSTSSSS
SSSGSMSGQNGSYPNPNRFNTNHSGELSGSVDSSRRFKPGHTRSRSDSQPLICSGRSSVN
SPALNSLPTGNICPSGKILKTAIPSKSSKTDVFGSRTGNYGIGSIIRGGGVDISGAANAV
KEKTYSQFASNPEELKRVGNVNYKKGNFAEALNYYDKAIAISPGNSAYHCNRAAALMGLK
RVAEAVKECEEAIRLDPSYFRAHQRLGSLLLSLGQVENARDHMCFQGHQPDQADLQKLQA
VEKHIGKCTDARRVGDWWSTLREADAAIASGADASPQLFACRAEALLKLHRLQDAELSLS
NARKSESSTVGSQSKIFGMLSEAYILFVQSQMELALGRFANALTTIERAGQIDPRSIEVS
VLFNNMRLVGRARARGNDLFKSERYTEACAAYGEGLRLDSSNAVLYCNRAACWYKLRQWE
KSVDDCDQALHIQPNYTKALLRRAASNTKLERWAEAVRDYEVLRKELPQDNEVAESLFLA
QVALKKSRGEDISDIKFGKEVELVSGLEQFQAAISSPGASVVHFEAASNLKCKQISPVFH
TLCTKYPSMNFLKVDVDESPAIATAENVRILPTFKIYKQGSCIKEVVSPSPEVLESLVRH
YPI

Transcript Sequence

Gene sequence data has not been registered.